Using Phylogeny and a Conserved Genomic Neighborhood Analysis to Extract and Visualize Gene Sets Involved in Target Gene Function: The Case of [NiFe]-hydrogenase and Succinate Dehydrogenase
Microbes and Environments Volume 40 Issue 4
published_at 2025-11-13
Supplemental Data : https://public.oa.kenkyu.yamaguchi-u.ac.jp/87221701-5498-41ba-845c-b9170979ed26
Title
Using Phylogeny and a Conserved Genomic Neighborhood Analysis to Extract and Visualize Gene Sets Involved in Target Gene Function: The Case of [NiFe]-hydrogenase and Succinate Dehydrogenase
Source Identifiers
[PISSN] 1342-6311
[EISSN] 1347-4405
Creator Keywords
genome information
protein maturation
gene cluster
molecular phylogeny
gene neighborhoods
Languages
eng
Resource Type
journal article
Publishers
Japanese Society of Microbial Ecology
Japanese Society of Soil Microbiology
Taiwan Society of Microbial Ecology
Japanese Society of Plant Microbe Interactions
Japanese Society for Extremophiles
Date Issued
2025-11-13
Rights
© Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions / Japanese Society for Extremophiles()
Creative Commons Attribution 4.0 International(https://creativecommons.org/licenses/by/4.0/)
File Version
Version of Record
Access Rights
open access
Relations
[isIdenticalTo]
10.1264/jsme2.me25018
[isSupplementedBy]
[URI]https://public.oa.kenkyu.yamaguchi-u.ac.jp/87221701-5498-41ba-845c-b9170979ed26
Funding Refs
Japan Society for the Promotion of Science
[crossref_funder]https://doi.org/10.13039/501100001691
Award
Search and functional analysis of maturation genes for syntrophic propionate oxidation using genomic information
21K05343
Funding Refs
Institute for Fermentation, Osaka
Award
LA-2023-018